Webdocker pull griffithlab/pvactools:latest-slim. Last pushed a month ago by susannakiwala. Digest. OS/ARCH. Vulnerabilities. Scanned. Compressed Size WebJan 6, 2024 · We first compared the effect of running pVACtools with the commonly used standard binding score cutoff of <= 500 nM (parameters: -b 500) to the newly added allele-specific score filter (parameters: -a). These cutoffs were, by default, applied to the “median” binding score of all prediction algorithms.
Vatools — Python documentation
WebLink to section 'Introduction' of 'vatools' Introduction VAtools is a python package that includes several tools to annotate VCF files with... Skip to main content Bell Degraded Capacity — September 28, 2024 Updated: December 10, 2024 10:46am EST WebThe Griffith Lab is an interdisciplinary team of biologists, bioinformaticians, computer scientists, and software engineers. Each member of the lab is trained to use computational biology approaches to address research questions relating to cancer biology and precision cancer medicine. We train students and post-docs with a biology background ... daffodil festival junction city oregon
Software - Griffith Lab
WebImage containing the vcf-annotation-tools python package. Docker Pull Command. docker pull griffithlab/vatools. Why Docker. Overview What is a Container Webregtools Link to section 'Introduction' of 'regtools' Introduction Regtools are tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context. WebJul 30, 2024 · This is a hotfix release. It fixes the following issues: In a previous version we implemented a faster method for reading data from the database in pVACapi. However, this would fail if the postgres user is not a superuser. This version fixes this issue by using the previous database file read method in this situation. This version marks certain columns … bio balanced pvc